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coSMicQC logo coSMicQC
  • GitHub Repository

Contents:

  • Examples
    • ContaminationDetector in action
    • coSMicQC in a nutshell
    • set a path for the parquet-based dataset
    • (in this case, CellProfiler SQLite data processed by CytoTable)
    • set a context directory for images associated with the dataset
    • create a cosmicqc CytoDataFrame (single-cell DataFrame)
    • display the dataframe
    • JUMP UMAP analysis with coSMicQC
  • Presentations
    • SBI2 Annual Confrerence 2024 Poster
  • Python API
  • Contributing
  • Contributor Covenant Code of Conduct

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