Skip to main content

Ctrl+K

Image-based Profiling Handbook

Preface

Getting Started

1. Introduction

Configuration

2. Configure Environment for Full Profiling Pipeline
3. Setup Images
4. Run each CellProfiler step
5. Create Profiles

Appendix

Appendix

Repository
Suggest edit

.md

Preface

Preface#

This is a handbook for processing image-based profiling datasets using CellProfiler and pycytominer

next

1. Introduction

By Beth Cimini, Tim Becker, Shantanu Singh, Gregory Way, Hamdah Abbasi, Callum Tromans-Coia