{
"cells": [
{
"cell_type": "markdown",
"id": "633f7334",
"metadata": {},
"source": [
"# NF1 3D pilot cropped voxel view\n",
"\n",
"View real 3D single-cell crops (with mask overlays) from two NF1 wells in one `CytoDataFrame`.\n",
"\n",
"Most of the setup below isn't about `CytoDataFrame` -- it's working around this\n",
"data's layout, which doesn't look like typical CellProfiler output:\n",
"\n",
"- There are no `Image_FileName_*`/`Image_PathName_*` columns, so each row's raw\n",
" image path is built from the patient/well/field metadata (`load_image_set`).\n",
"- Every well's mask file has the exact same generic name (`nuclei_mask.tiff`),\n",
" so combining two wells into one table needs `stage_mask` to tell them apart\n",
" -- a single-well notebook wouldn't need this at all.\n",
"\n",
"The actual `CytoDataFrame(...)` call at the end is just a handful of arguments."
]
},
{
"cell_type": "code",
"execution_count": 1,
"id": "7967ce3f",
"metadata": {
"execution": {
"iopub.execute_input": "2026-09-22T22:35:54.865756Z",
"iopub.status.busy": "2026-09-22T22:35:54.865377Z",
"iopub.status.idle": "2026-09-22T22:35:55.409082Z",
"shell.execute_reply": "2026-09-22T22:35:55.408497Z"
}
},
"outputs": [],
"source": [
"import os\n",
"import pathlib\n",
"import re\n",
"import tempfile\n",
"\n",
"import pandas as pd\n",
"\n",
"from cytodataframe import CytoDataFrame\n",
"\n",
"# Local mount point for bandicoot. Set BANDICOOT_LOCAL_BASE if it is mounted\n",
"# somewhere else on your machine.\n",
"BANDICOOT_LOCAL_BASE = pathlib.Path(\n",
" os.environ.get(\"BANDICOOT_LOCAL_BASE\", \"~/mnt/bandicoot\")\n",
").expanduser()\n",
"DATA_DIR = BANDICOOT_LOCAL_BASE / \"NF1_organoid_data/data\"\n",
"PROFILES_DIR = (\n",
" DATA_DIR / \"image_based_profiles_production_zedprofiler/ibp/sc_profiles_related\"\n",
")\n",
"if not PROFILES_DIR.is_dir():\n",
" raise FileNotFoundError(\n",
" f\"Profiles not found at {PROFILES_DIR}. Set the BANDICOOT_LOCAL_BASE \"\n",
" \"environment variable to wherever bandicoot is mounted on this machine.\"\n",
" )\n",
"\n",
"# An \"image set\" here is one well + field-of-view (one 3D image). Add every\n",
"# image set you want to view to this list -- e.g. all wells/fields in a\n",
"# plate for per-plate QC -- not just the two shown here.\n",
"IMAGE_SETS = [\n",
" \"NF0055_T1__NF0055_T1__B10__F1\",\n",
" \"NF0014_T1__NF0014_T1__C4__F2\",\n",
"]\n",
"CHANNEL = \"DNA\"\n",
"CHANNEL_CODE = \"405\"\n",
"COMPARTMENT = \"Nuclei\"\n",
"\n",
"# Every well's mask file has the same generic name (e.g. \"nuclei_mask.tiff\"),\n",
"# but CytoDataFrame's data_mask_context_dir only matches masks by filename\n",
"# pattern within one shared directory -- it can't tell two identically-named\n",
"# files in different wells apart. MASK_LINK_DIR is a scratch directory (not\n",
"# part of the repo) that `stage_mask` below fills with per-well symlinks to\n",
"# the real mask files, renamed to embed each well's own identifier, so that\n",
"# matching works.\n",
"MASK_LINK_DIR = pathlib.Path(tempfile.gettempdir()) / \"cytodataframe_nf1_3d_mask_links\"\n",
"MASK_LINK_DIR.mkdir(exist_ok=True)\n",
"\n",
"\n",
"def load_image_set(image_set: str) -> tuple[pd.DataFrame, pathlib.Path, pathlib.Path]:\n",
" profiles = pd.read_parquet(PROFILES_DIR / f\"{image_set}.parquet\").head(1)\n",
" row = profiles.iloc[0]\n",
" patient = row[\"Metadata_Biology_PatientTumor\"]\n",
" # e.g. B10-1\n",
" well_field = (\n",
" f\"{row['Metadata_Experiment_WellID']}-{row['Metadata_Imaging_FieldID']}\"\n",
" )\n",
"\n",
" channel_path = (\n",
" DATA_DIR\n",
" / patient\n",
" / \"zstack_images\"\n",
" / well_field\n",
" / f\"{well_field}_{CHANNEL_CODE}.tif\"\n",
" )\n",
" mask_path = (\n",
" DATA_DIR\n",
" / patient\n",
" / \"segmentation_masks\"\n",
" / well_field\n",
" / f\"{COMPARTMENT.lower()}_mask.tiff\"\n",
" )\n",
" profiles[f\"Image_FileName_{CHANNEL}\"] = str(channel_path)\n",
" return profiles, channel_path, mask_path\n",
"\n",
"\n",
"def stage_mask(channel_path: pathlib.Path, mask_path: pathlib.Path) -> pathlib.Path:\n",
" # See MASK_LINK_DIR above for why this exists.\n",
" link = MASK_LINK_DIR / f\"{channel_path.stem}__{mask_path.name}\"\n",
" if not link.exists():\n",
" link.symlink_to(mask_path)\n",
" return link"
]
},
{
"cell_type": "markdown",
"id": "cad4d181",
"metadata": {},
"source": [
"Load one object per well into a single two-row table."
]
},
{
"cell_type": "code",
"execution_count": 2,
"id": "ee55b730",
"metadata": {
"execution": {
"iopub.execute_input": "2026-09-22T22:35:55.410551Z",
"iopub.status.busy": "2026-09-22T22:35:55.410439Z",
"iopub.status.idle": "2026-09-22T22:35:56.906940Z",
"shell.execute_reply": "2026-09-22T22:35:56.905833Z"
}
},
"outputs": [],
"source": [
"profile_rows = []\n",
"for image_set in IMAGE_SETS:\n",
" profiles, channel_path, mask_path = load_image_set(image_set)\n",
" stage_mask(channel_path, mask_path)\n",
" profile_rows.append(profiles)\n",
"\n",
"profiles = pd.concat(profile_rows, ignore_index=True)\n",
"mask_name = mask_path.name"
]
},
{
"cell_type": "code",
"execution_count": 3,
"id": "f8431d7c",
"metadata": {
"execution": {
"iopub.execute_input": "2026-09-22T22:35:56.910234Z",
"iopub.status.busy": "2026-09-22T22:35:56.909395Z",
"iopub.status.idle": "2026-09-22T22:44:25.572399Z",
"shell.execute_reply": "2026-09-22T22:44:25.570369Z"
}
},
"outputs": [
{
"data": {
"application/vnd.jupyter.widget-view+json": {
"model_id": "4f7a043f9747408581b92b1235074112",
"version_major": 2,
"version_minor": 0
},
"text/plain": [
"GridspecLayout(children=(HTML(value=\"0
"
}
},
"1ae93a92b393474c916464624d1d7cbd": {
"model_module": "@jupyter-widgets/output",
"model_module_version": "1.0.0",
"model_name": "OutputModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/output",
"_model_module_version": "1.0.0",
"_model_name": "OutputModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/output",
"_view_module_version": "1.0.0",
"_view_name": "OutputView",
"layout": "IPY_MODEL_267839840c89421e96530c63c0d6790e",
"msg_id": "",
"outputs": [],
"tabbable": null,
"tooltip": null
}
},
"2153def2b6bf4d48883458edb4154391": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "HTMLStyleModel",
"state": {
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "HTMLStyleModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "StyleView",
"background": null,
"description_width": "",
"font_size": null,
"text_color": null
}
},
"22ff6b30fa88411a87b08dcf69413b87": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "HTMLModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "HTMLModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/controls",
"_view_module_version": "2.0.0",
"_view_name": "HTMLView",
"description": "",
"description_allow_html": false,
"layout": "IPY_MODEL_99e737acef45477c938e5002e5a3f3ac",
"placeholder": "",
"style": "IPY_MODEL_95ef186605a24d409afcf638a50c0c39",
"tabbable": null,
"tooltip": null,
"value": "1
"
}
},
"267839840c89421e96530c63c0d6790e": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": null,
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": null,
"justify_content": null,
"justify_items": null,
"left": null,
"margin": null,
"max_height": "700px",
"max_width": null,
"min_height": null,
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": "visible",
"padding": null,
"right": null,
"top": null,
"visibility": null,
"width": "100%"
}
},
"27567189e2924de594242f7e964b9cdc": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": null,
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": null,
"justify_content": null,
"justify_items": null,
"left": null,
"margin": null,
"max_height": null,
"max_width": null,
"min_height": null,
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": null,
"padding": null,
"right": null,
"top": null,
"visibility": null,
"width": null
}
},
"281fe9ec96a648faa5c7329b6d12565d": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "SliderStyleModel",
"state": {
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "SliderStyleModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "StyleView",
"description_width": "auto",
"handle_color": null
}
},
"49c6a3bdadaa4f0fadb5237d8d3c5a9a": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "HTMLStyleModel",
"state": {
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "HTMLStyleModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "StyleView",
"background": null,
"description_width": "",
"font_size": null,
"text_color": null
}
},
"4f7a043f9747408581b92b1235074112": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "GridBoxModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "GridBoxModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/controls",
"_view_module_version": "2.0.0",
"_view_name": "GridBoxView",
"box_style": "",
"children": [
"IPY_MODEL_abfc5e34fa8641ea80d4620c02df2107",
"IPY_MODEL_98709585fbf14e38aad924ea451c38da",
"IPY_MODEL_1946448e6ee5495ab714b601af5c35d9",
"IPY_MODEL_00b6470f94d64caabe898455baa6f743",
"IPY_MODEL_22ff6b30fa88411a87b08dcf69413b87",
"IPY_MODEL_7d0acc65428a48db8a0f7f047db19902"
],
"layout": "IPY_MODEL_039033a3903d4e65b803ba07b5956c66",
"tabbable": null,
"tooltip": null
}
},
"5434424526a64314bb42a2a16d26b73d": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "HTMLModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "HTMLModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/controls",
"_view_module_version": "2.0.0",
"_view_name": "HTMLView",
"description": "",
"description_allow_html": false,
"layout": "IPY_MODEL_66a8b708fc8043eab3a8ee41422c6f1f",
"placeholder": "",
"style": "IPY_MODEL_49c6a3bdadaa4f0fadb5237d8d3c5a9a",
"tabbable": null,
"tooltip": null,
"value": ""
}
},
"5f902917855647e48299fd98ceb37aaa": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": "widget002",
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": "28px",
"justify_content": null,
"justify_items": null,
"left": null,
"margin": null,
"max_height": null,
"max_width": null,
"min_height": null,
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": null,
"padding": null,
"right": null,
"top": null,
"visibility": null,
"width": "100%"
}
},
"649a7f3505d641598c6511810c666232": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": "stretch",
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": "flex",
"flex": null,
"flex_flow": null,
"grid_area": "widget006",
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": "260px",
"justify_content": "flex-start",
"justify_items": null,
"left": null,
"margin": "0",
"max_height": null,
"max_width": null,
"min_height": null,
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": "hidden",
"padding": "0",
"right": null,
"top": null,
"visibility": null,
"width": "100%"
}
},
"66a8b708fc8043eab3a8ee41422c6f1f": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": null,
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": "100%",
"justify_content": null,
"justify_items": null,
"left": null,
"margin": "0",
"max_height": null,
"max_width": null,
"min_height": "260px",
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": null,
"padding": "0",
"right": null,
"top": null,
"visibility": null,
"width": "100%"
}
},
"7d0acc65428a48db8a0f7f047db19902": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "BoxModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "BoxModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/controls",
"_view_module_version": "2.0.0",
"_view_name": "BoxView",
"box_style": "",
"children": [
"IPY_MODEL_5434424526a64314bb42a2a16d26b73d"
],
"layout": "IPY_MODEL_649a7f3505d641598c6511810c666232",
"tabbable": null,
"tooltip": null
}
},
"87b67c366fb04ef0b750ddc30887dc9a": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": null,
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": null,
"justify_content": null,
"justify_items": null,
"left": null,
"margin": null,
"max_height": "700px",
"max_width": null,
"min_height": null,
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": "visible",
"padding": null,
"right": null,
"top": null,
"visibility": null,
"width": "100%"
}
},
"8d10d5a644ea4dd89bea4062aed52dde": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": null,
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": null,
"justify_content": null,
"justify_items": null,
"left": null,
"margin": null,
"max_height": null,
"max_width": null,
"min_height": null,
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": null,
"padding": null,
"right": null,
"top": null,
"visibility": null,
"width": null
}
},
"95ef186605a24d409afcf638a50c0c39": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "HTMLStyleModel",
"state": {
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "HTMLStyleModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "StyleView",
"background": null,
"description_width": "",
"font_size": null,
"text_color": null
}
},
"98709585fbf14e38aad924ea451c38da": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "HTMLModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "HTMLModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/controls",
"_view_module_version": "2.0.0",
"_view_name": "HTMLView",
"description": "",
"description_allow_html": false,
"layout": "IPY_MODEL_5f902917855647e48299fd98ceb37aaa",
"placeholder": "",
"style": "IPY_MODEL_10a5efab8c224bdbae8e393b232cd4f3",
"tabbable": null,
"tooltip": null,
"value": "Image_FileName_DNA
"
}
},
"99e737acef45477c938e5002e5a3f3ac": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": "widget005",
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": "100%",
"justify_content": null,
"justify_items": null,
"left": null,
"margin": null,
"max_height": null,
"max_width": null,
"min_height": null,
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": null,
"padding": null,
"right": null,
"top": null,
"visibility": null,
"width": "100%"
}
},
"9d7290fd2f3746cca7a43d9933464359": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "IntSliderModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "IntSliderModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/controls",
"_view_module_version": "2.0.0",
"_view_name": "IntSliderView",
"behavior": "drag-tap",
"continuous_update": false,
"description": "Image adjustment:",
"description_allow_html": false,
"disabled": false,
"layout": "IPY_MODEL_27567189e2924de594242f7e964b9cdc",
"max": 100,
"min": 0,
"orientation": "horizontal",
"readout": true,
"readout_format": "d",
"step": 1,
"style": "IPY_MODEL_101ba03f004e4783b96193d6db47262d",
"tabbable": null,
"tooltip": null,
"value": 50
}
},
"a0ca7155f15a4a3899901b4675432cb3": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": null,
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": "100%",
"justify_content": null,
"justify_items": null,
"left": null,
"margin": "0",
"max_height": null,
"max_width": null,
"min_height": "260px",
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": null,
"padding": "0",
"right": null,
"top": null,
"visibility": null,
"width": "100%"
}
},
"a1012ff293eb401893241910feac65cc": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "HTMLStyleModel",
"state": {
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "HTMLStyleModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "StyleView",
"background": null,
"description_width": "",
"font_size": null,
"text_color": null
}
},
"aac99c5f0f4b4da084eadba534e24334": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "HTMLModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "HTMLModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/controls",
"_view_module_version": "2.0.0",
"_view_name": "HTMLView",
"description": "",
"description_allow_html": false,
"layout": "IPY_MODEL_a0ca7155f15a4a3899901b4675432cb3",
"placeholder": "",
"style": "IPY_MODEL_d6e730a83db14429a8313ce4706e596e",
"tabbable": null,
"tooltip": null,
"value": ""
}
},
"abfc5e34fa8641ea80d4620c02df2107": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "HTMLModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "HTMLModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/controls",
"_view_module_version": "2.0.0",
"_view_name": "HTMLView",
"description": "",
"description_allow_html": false,
"layout": "IPY_MODEL_05be29ce0dc840cf8f05eb2907fb9c9c",
"placeholder": "",
"style": "IPY_MODEL_2153def2b6bf4d48883458edb4154391",
"tabbable": null,
"tooltip": null,
"value": ""
}
},
"c1b8bb8f8a67479ba8aa1977c5f7887e": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": null,
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": null,
"justify_content": null,
"justify_items": null,
"left": null,
"margin": null,
"max_height": null,
"max_width": null,
"min_height": null,
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": null,
"padding": null,
"right": null,
"top": null,
"visibility": null,
"width": null
}
},
"ce1feb193d0241aca1d58d406988c8e1": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": null,
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": null,
"justify_content": null,
"justify_items": null,
"left": null,
"margin": null,
"max_height": "700px",
"max_width": null,
"min_height": null,
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": "visible",
"padding": null,
"right": null,
"top": null,
"visibility": null,
"width": "100%"
}
},
"d3da836949dd44c08f652796e982cb59": {
"model_module": "@jupyter-widgets/output",
"model_module_version": "1.0.0",
"model_name": "OutputModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/output",
"_model_module_version": "1.0.0",
"_model_name": "OutputModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/output",
"_view_module_version": "1.0.0",
"_view_name": "OutputView",
"layout": "IPY_MODEL_87b67c366fb04ef0b750ddc30887dc9a",
"msg_id": "",
"outputs": [],
"tabbable": null,
"tooltip": null
}
},
"d6e730a83db14429a8313ce4706e596e": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "HTMLStyleModel",
"state": {
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "HTMLStyleModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "StyleView",
"background": null,
"description_width": "",
"font_size": null,
"text_color": null
}
},
"f3657d6d3cfb430996c3fc2c93b50747": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "IntSliderModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "IntSliderModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/controls",
"_view_module_version": "2.0.0",
"_view_name": "IntSliderView",
"behavior": "drag-tap",
"continuous_update": false,
"description": "Image adjustment:",
"description_allow_html": false,
"disabled": false,
"layout": "IPY_MODEL_1167aad1529646fb810382d21208169f",
"max": 100,
"min": 0,
"orientation": "horizontal",
"readout": true,
"readout_format": "d",
"step": 1,
"style": "IPY_MODEL_1740857c7e8a4284b1137b20e4dbbe1f",
"tabbable": null,
"tooltip": null,
"value": 50
}
},
"f64a6be3ac654e608c208d031880bd66": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": "widget003",
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": "100%",
"justify_content": null,
"justify_items": null,
"left": null,
"margin": null,
"max_height": null,
"max_width": null,
"min_height": null,
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": null,
"padding": null,
"right": null,
"top": null,
"visibility": null,
"width": "100%"
}
},
"f678e30977954fc1b9fe0bbbce9f78de": {
"model_module": "@jupyter-widgets/controls",
"model_module_version": "2.0.0",
"model_name": "IntSliderModel",
"state": {
"_dom_classes": [],
"_model_module": "@jupyter-widgets/controls",
"_model_module_version": "2.0.0",
"_model_name": "IntSliderModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/controls",
"_view_module_version": "2.0.0",
"_view_name": "IntSliderView",
"behavior": "drag-tap",
"continuous_update": false,
"description": "Image adjustment:",
"description_allow_html": false,
"disabled": false,
"layout": "IPY_MODEL_8d10d5a644ea4dd89bea4062aed52dde",
"max": 100,
"min": 0,
"orientation": "horizontal",
"readout": true,
"readout_format": "d",
"step": 1,
"style": "IPY_MODEL_281fe9ec96a648faa5c7329b6d12565d",
"tabbable": null,
"tooltip": null,
"value": 50
}
},
"ff591446d7894b1fb639b526a471bc8f": {
"model_module": "@jupyter-widgets/base",
"model_module_version": "2.0.0",
"model_name": "LayoutModel",
"state": {
"_model_module": "@jupyter-widgets/base",
"_model_module_version": "2.0.0",
"_model_name": "LayoutModel",
"_view_count": null,
"_view_module": "@jupyter-widgets/base",
"_view_module_version": "2.0.0",
"_view_name": "LayoutView",
"align_content": null,
"align_items": null,
"align_self": null,
"border_bottom": null,
"border_left": null,
"border_right": null,
"border_top": null,
"bottom": null,
"display": null,
"flex": null,
"flex_flow": null,
"grid_area": null,
"grid_auto_columns": null,
"grid_auto_flow": null,
"grid_auto_rows": null,
"grid_column": null,
"grid_gap": null,
"grid_row": null,
"grid_template_areas": null,
"grid_template_columns": null,
"grid_template_rows": null,
"height": null,
"justify_content": null,
"justify_items": null,
"left": null,
"margin": null,
"max_height": null,
"max_width": null,
"min_height": null,
"min_width": null,
"object_fit": null,
"object_position": null,
"order": null,
"overflow": null,
"padding": null,
"right": null,
"top": null,
"visibility": null,
"width": null
}
}
},
"version_major": 2,
"version_minor": 0
}
}
},
"nbformat": 4,
"nbformat_minor": 5
}